All to start work in Linux and MacOS

.bins/jupyter

@@ -0,0 +1,3 @@
+#! /bin/bash
+jupyter-notebook --allow-root --ip=0.0.0.0 --NotebookApp.token=''
+

.gitignore

@@ -0,0 +1 @@
+config-files/.*

Dockerfile

@@ -5,22 +5,23 @@ MAINTAINER gmarxcc
 LABEL version = "0.1"
 ENV LANG = C.UTF-8 LC_ALL=C.UTF-8
 
-# installing python 3, git and pip3:
+# installing vim git make and other tools
 RUN pacman -Syu --noconfirm
 RUN pacman -Syu --noconfirm vim git make
 RUN pacman -Syu --noconfirm jupyter-notebook r gcc
+RUN pacman -Syu --noconfirm pandoc gnuplot emacs
+
+#Installing LaTeX
+#-->   Delete comment to enable Full LaTeX installation
+#RUN pacman -Syu --noconfirm texlive-most
+#--> basic installation or minimal
+RUN pacman -Syu --noconfirm texlive-core
 
 # Installing R packages and enabling R in jupyter
-COPY .bashrc .bashrc
 RUN R -e "install.packages('IRkernel',dependencies=TRUE, repos='http://cran.rstudio.com/')"
 RUN R -e "IRkernel::installspec(user = FALSE)"
 
-# Installing LaTeX
-#Delete comment to enable Full LaTeX installation
-#RUN pacman -Syu --noconfirm texlive-most
-#basic installation or minimal
-RUN pacman -Syu --noconfirm texlive-core
-# installing modules:
+# Installng modules:
 #RUN pip3 install numpy \
 #pandas \
 #matplotlib \
@@ -32,6 +33,8 @@ RUN pacman -Syu --noconfirm texlive-core
 #numdifftools \
 
 WORKDIR /home
-#RUN pip install -r requirements.txt
+COPY .bashrc .bashrc
+COPY .bins/* /usr/local/bin
+
 EXPOSE 8888
 #CMD ["flask", "run"]

Readme.md

@@ -1,2 +1,15 @@
+# Readme 
+
+To run the container use:
+
+``` shell
 docker run -it -p 8888:8888 -v /Users/gmarx/lwc/academia/courses/md/arch-container/data:/home arch-container
-'docker run -it -p 8888:8888 -v /Users/gmarx/lwc/academia/courses/md/arch-container/data:/home arch-container'
+```
+
+or use the command `./runcon.sh` command
+
+inside the container you can run several commands to work with, like jupyter notebook:
+
+``` shell
+jupyter-notebook --allow-root --ip=0.0.0.0 --NotebookApp.token=''
+```

data/markdown/example.md

@@ -0,0 +1,11 @@
+# Introduction
+
+Some text here
+
+# Methodology
+
+More text
+
+## Experimental procedure
+
+More texte over here

runcon.sh

@@ -1 +1,3 @@
-docker run -it -p 8888:8888 -v $(pwd)/data:/home -v $(pwd)/config-files/:/root arch-container
+docker run -it -p 8888:8888 -v $(pwd)/data:/home  \
+-v $(pwd)/config-files/:/root  \
+gmarx/arch-container:0.1